rs33362803 SNP Detail

Summary

• ID
  rs33362803
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7665101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATAGCGGTG AAGAATGCAT
  AGAAGCCAGT CAGGTGAAAA AAATGGGTGA AAGAAATGAT GTTTTATCCG AGGCAATATT
  TTTTCCTTGT GGGCCTTAGT GAGCTTCAGT TTTAAGCAGG AGATTGGATT GCATGCCTGC
  TGTATTTCAT TTTCATAGTG TGCCCCTTCA AAGCTAAAGA CTATAAGACC TGTAAGATAC
  R
  GTTACTCTGG AAATGGCTTG CAAGCTGTCT ATGATGCCTG TGTCGAGAGG GAGCTTGGAT
  CCAGGGATCT GGGATATTGT TCCACAGATG AAGGGTATAT AGGTATGCCA GTGAGGCTGT
  CCATGGTGGT AATAGCGTCC ATAGCAGCCT GAGATCTTTG CTTCTGATGA GAGGTTGGGA
  GTCAACAAAG GGAAGGTGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46805332	NES10987026	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	A	A	A	A		G	G	A	G		A
ss325888282	CHEV_X_7375988	CHEVERUD	SCREENING_POP	f	SNP									A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33362803					SNP	A	A	G	A	A	A	A	A	A	G	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46805332	NES10987026	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7665101 () rs orientation: forward

Symbol	Name	Function Class
Gripap1	GRIP1 associated protein 1	within coordinates
Rr4742	regulatory region 4742	1101 bp distal
Rr10055	regulatory region 10055	1194 bp distal
Tssr160443	transcription start site region 160443	1607 bp upstream