rs33363696 SNP Detail

Summary

• ID
  rs33363696
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7665285 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGACCTGTA AGATACAGTT
  ACTCTGGAAA TGGCTTGCAA GCTGTCTATG ATGCCTGTGT CGAGAGGGAG CTTGGATCCA
  GGGATCTGGG ATATTGTTCC ACAGATGAAG GGTATATAGG TATGCCAGTG AGGCTGTCCA
  TGGTGGTAAT AGCGTCCATA GCAGCCTGAG ATCTTTGCTT CTGATGAGAG GTTGGGAGTC
  R
  ACAAAGGGAA GGTGGTTTTC AGTATTCTCT CTCTTTTTTT TTTTTGGACT TTGTTACTTA
  AAAGATGTGT CAGTTGGAAA TTGTTTACTA TCACCATGTC TCAGTGTCTT TATCCACAGA
  GTGTAAGGGC AATCACATTA TTGGCTTCTT GTGGGAATCT GATGAATTCT ACACTGAGGG
  GCAAATGCTA TTTGTGTGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46805335	NES10987027	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33363696					SNP	A	A	A	A	A	A	G	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46805335	NES10987027	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7665285 () rs orientation: forward

Symbol	Name	Function Class
Gripap1	GRIP1 associated protein 1	within coordinates
Rr4742	regulatory region 4742	1285 bp distal
Rr10055	regulatory region 10055	1378 bp distal
Tssr160443	transcription start site region 160443	1423 bp upstream