rs33363953 SNP Detail

Summary

• ID
  rs33363953
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7661992 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTGATTTT AATATCTTGG
  CTATTTCTAA ACCTTCTGGG CAGTTGGAAG TCCTGTGGGT TTTGTTTTTT CCTAGTAGTC
  TTCTATATGT ATGGTTGATC AGTTTGTGAG TTTTCAGTGG GTTTTAAGGA AAAATATACT
  GTAGGAAAAA AAAATGTTAT TTCCAAGACT TCGCCTGATT GGAATATACT GCCTTTAAAC
  R
  CAGAACAAGA ACACTGCGAT CGAGATGCAT GTATACAATA AGAAATGGTC AAAAATAACA
  ACAGAAGCCA TACAAGGGCT TGGAATACGG CTTAATTGCT GGAGTGCCTG AGTCGTACGA
  ATGCAACCCT GGTTTTGATC CCTAGCACTG CACAAGCTCA TACCTATTAC CTTAGCACTT
  GGGCTTTAGA GGCAGAAGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46805299	NES10987315	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33363953					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46805299	NES10987315	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7661992 () rs orientation: forward

Symbol	Name	Function Class
Gripap1	GRIP1 associated protein 1	within coordinates
Rr4741	regulatory region 4741	1992 bp distal
Rr4742	regulatory region 4742	1609 bp proximal
Rr7807	regulatory region 7807	365 bp distal
Rr10055	regulatory region 10055	1409 bp proximal
Tssr160440	transcription start site region 160440	1440 bp downstream
Tssr160441	transcription start site region 160441	1409 bp downstream
Tssr160442	transcription start site region 160442	1339 bp downstream