rs33364995 SNP Detail

Summary

• ID
  rs33364995
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7662344 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAGCTCAT ACCTATTACC
  TTAGCACTTG GGCTTTAGAG GCAGAAGACT TAGAAGTTTA AGGTCATCCT CACCTACATA
  GTGAGTTCCA GGCCACTGGG CTACATGACA AATCAAAGAA CAGAGGCAAA TATTTAAAAA
  GAAGCTCAAA ACAAAATACA ACAGAAAACA ATCTTTAAGC ATTTACAATG CCAGGAGAGA
  M
  CATTTAATGG TCAGTAATTC TAAGCAGGGA CTCTGGAGCC AGAAGGCCCA GATGAGGATC
  TTGGCTGTAG AGTTTACCAA CTCAAACTTT AAACGTGTCA CTGAGCCTCC TCTTTCTTGA
  TTCTCAAATG TCTAAAATGG AAATGGTAAT GCTAGAAGCA CCTGCCTTCC CGGGCTTTTG
  TGAGGATTCA AACATATGTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss46805302	NES10987261	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs33364995					SNP	C	C	C	C	C	C	C	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46805302	NES10987261	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7662344 () rs orientation: forward

Symbol	Name	Function Class
Gripap1	GRIP1 associated protein 1	within coordinates
Rr4742	regulatory region 4742	1257 bp proximal
Rr7807	regulatory region 7807	717 bp distal
Rr10055	regulatory region 10055	1057 bp proximal
Tssr160440	transcription start site region 160440	1792 bp downstream
Tssr160441	transcription start site region 160441	1761 bp downstream
Tssr160442	transcription start site region 160442	1691 bp downstream