rs33365975 SNP Detail

Summary

• ID
  rs33365975
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:40056673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGC CTCTCAGCGT TTACTTACAC
  R
  GTCCCCTTGC TTGATTGAAA CACCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss46266956	mCV24622186	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss144619539	ENSMUSSNP1654137	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss322624419	CHEV_8_40688986	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs33365975					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:40056673 () rs orientation: forward

Symbol	Name	Function Class
Msr1	macrophage scavenger receptor 1	within coordinates
Tssr2550	transcription start site region 2550	1835 bp downstream
Tssr80996	transcription start site region 80996	905 bp downstream
Tssr80997	transcription start site region 80997	954 bp downstream
Tssr80998	transcription start site region 80998	1328 bp downstream
Tssr80999	transcription start site region 80999	1392 bp downstream
Tssr81000	transcription start site region 81000	1587 bp downstream
Tssr81001	transcription start site region 81001	1643 bp downstream
Tssr81002	transcription start site region 81002	1657 bp downstream
Tssr81003	transcription start site region 81003	1679 bp downstream
Tssr81004	transcription start site region 81004	1739 bp downstream
Tssr81005	transcription start site region 81005	1760 bp downstream
Tssr81006	transcription start site region 81006	1797 bp downstream
Tssr81007	transcription start site region 81007	1862 bp downstream
Tssr81008	transcription start site region 81008	1972 bp downstream
Tssr81009	transcription start site region 81009	1988 bp downstream