rs33366049 SNP Detail

Summary

• ID
  rs33366049
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7663023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATGTTTGT ATTCATTCCG
  TGGTTTTGAT CTGCCTCAGC TCTACCACCT CTCATCTACT TCTGCAGCTT TCTGATCTTC
  TTACCTGGAT TTTTCTCTAT TGATCCACTC CACTATTTAG CAGAAGTTAT TCTGACCTCT
  AGATCTGAGC CCACTGCTTC TTTAATTAAT CCCTTCTGGT ATGAAGCTCT CTCCTCAGTC
  M
  CTGGAGCTTT CTGGTGCTCT CATAAACTAC TGCCAAGGAT TTTCTGCATC ACTCTGGGTT
  CCTTTATAAT CCCCTCCCTA CTCCTCTCAG GCCCCAATGG TACTTACCGG AAGGCCTGAT
  GCTAGAGCCT GCCTGCCAAG ATATTTCATC AGCTCAGTTG TTCCATTGAC AGATAAAGGG
  ACCTGCTTTA TATCCTGTGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46805317	NES10987146	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33366049					SNP	C	C	C	C	C	C	C	C	C	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46805317	NES10987146	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7663023 () rs orientation: forward

Symbol	Name	Function Class
Gripap1	GRIP1 associated protein 1	within coordinates
Rr4742	regulatory region 4742	578 bp proximal
Rr7807	regulatory region 7807	1396 bp distal
Rr10055	regulatory region 10055	378 bp proximal