rs33366052 SNP Detail

Summary

• ID
  rs33366052
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7663025 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTTTGTAT TCATTCCGTG
  GTTTTGATCT GCCTCAGCTC TACCACCTCT CATCTACTTC TGCAGCTTTC TGATCTTCTT
  ACCTGGATTT TTCTCTATTG ATCCACTCCA CTATTTAGCA GAAGTTATTC TGACCTCTAG
  ATCTGAGCCC ACTGCTTCTT TAATTAATCC CTTCTGGTAT GAAGCTCTCT CCTCAGTCCC
  Y
  GGAGCTTTCT GGTGCTCTCA TAAACTACTG CCAAGGATTT TCTGCATCAC TCTGGGTTCC
  TTTATAATCC CCTCCCTACT CCTCTCAGGC CCCAATGGTA CTTACCGGAA GGCCTGATGC
  TAGAGCCTGC CTGCCAAGAT ATTTCATCAG CTCAGTTGTT CCATTGACAG ATAAAGGGAC
  CTGCTTTATA TCCTGTGTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46805320	NES10987147	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33366052					SNP	T	T	T	T	T	T	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46805320	NES10987147	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7663025 () rs orientation: forward

Symbol	Name	Function Class
Gripap1	GRIP1 associated protein 1	within coordinates
Rr4742	regulatory region 4742	576 bp proximal
Rr7807	regulatory region 7807	1398 bp distal
Rr10055	regulatory region 10055	376 bp proximal