rs33366487 SNP Detail

Summary

• ID
  rs33366487
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46037202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTGGGGAG GGGGCGGCTA GCTGTTGATT TGGTGCCCTG
  CACCTGTGCA GAACCCAGCT CCCATGTCTT GTGCCTGCTC GCCCGCCCTG GCAGGCCCCA
  Y
  GCCTGGTCCA GGGGACTTTT ATGGGCTCTT AGTAAACAAA TAGTGCTTTA TTTGTTTCTC
  AGCTCACCTG GTGCATGGAG TCCCGGTTAG CCTGTGGAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39527246	mCV24294365	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss145695449	ENSMUSSNP173013	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss325403926	CHEV_17_45863225	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33366487					SNP	T	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46037202 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9206	CpG island 9206	1836 bp distal
Gm35456	predicted gene, 35456	within coordinates
Rr331486	regulatory region 331486	1402 bp distal
Rr331487	regulatory region 331487	599 bp proximal
Rr339880	regulatory region 339880	1601 bp distal
Rr339881	regulatory region 339881	within coordinates