rs33368676 SNP Detail

Summary

• ID
  rs33368676
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118092365 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACAGGTAAA TCATCTCCAT
  GTGCCTACAC ATCGCTTCTG TTCTGTGCAC AAAGGCCATT TTTTTCTTTG TATGTGTGTG
  CATGTGTAAG TGTGTGCATC CTGTGCAGGT CTATATTATA CACATGTACA AATGCAACCC
  AGGTGTGCCA ATATGGGTGT GGAGATCAGA GGGCAATCTC AAGTATCAAT ACTTGCCTTC
  Y
  ACCTTGTTTA AGACAGAGTC CCTTTATTGT CTTTTCAGGG CATATGTGAG ACTGAGATTG
  GCTAACCCAT CAACTTTCTA GAATTTTCTT TCTCCACCCC CATCTCCCCA GAGGAGCTCT
  GGGCATGCAG ATGTCTATTA CCGCCTCCAG CTTTTATGGG GCTTTAGATC TAAGAGCTCG
  GGTTCTCATA CTCCAATGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45270588	mCV23826936	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33368676					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118092365 () rs orientation: forward

Symbol	Name	Function Class
Gm29232	predicted gene 29232	within coordinates
Gm75384	predicted gene, 75384	1720 bp upstream
Rr397203	regulatory region 397203	1384 bp upstream
Rr563205	regulatory region 563205	1851 bp distal
Rr563206	regulatory region 563206	1230 bp proximal
Rr563207	regulatory region 563207	1433 bp proximal
Rr563208	regulatory region 563208	1758 bp proximal
Rr563209	regulatory region 563209	1944 bp proximal