rs33369217 SNP Detail

Summary

• ID
  rs33369217
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:60744940 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTATTTTCCT TTGGGATCAC TGGTCACTGA GATGTCTTCA
  AGTATTTGAT TTGATTTTTT TTATTGGTTT GTATGTATGA AACAGAGTCT TATAGGCTAA
  Y
  CTTGAACTCC CAAACCTAAG AAAGTTTGTA TTGTGCTGGG ACTACAAGCC TGTGCCACCT
  CACAAAGAAA TGTTCTTTAT TAAGGTACCT CTCTACAGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45270239	mCV24770147	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss146652227	ENSMUSSNP5977703	ENSEMBL	ENSEMBL_Sanger	f	SNP	T			C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33369217					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:60744940 () rs orientation: forward

Symbol	Name	Function Class
Rbms1	RNA binding motif, single stranded interacting protein 1	within coordinates
Rr49832	regulatory region 49832	61 bp proximal
Rr49833	regulatory region 49833	1661 bp proximal
Tssr24240	transcription start site region 24240	1889 bp downstream