rs33373152 SNP Detail

Summary

• ID
  rs33373152
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84625465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CGTTGAACTT GAATAAGCTG CCGGATTCGG TATTTAGGCT GCTTTTGGGT GGATTCCCTT
  CCCCAAGGAT CCAAGCCCAG TTTTTGCTTC TCCTCAGCCA TCAATCTTAA GAGTTGCACC
  CATCCTTCGT AAAACGGATT CTCAGCGCGG CAGCTTCCAA GCTCTGTTCT TACCTCTCTG
  GATTCCGCTC CCCTGAACCC ACACCCCAAC CCCCGCACTG AGTTGTCTAT ATTGCTTAAG
  TGCCTGGTTT TGGCCCCGGG TTCAGCTTTA TAGCCTCCCC CCACCAAAAA AAAAAAAAAA
  M
  ACCAAAAAAA CAAATAAACT ATAAGTCTAG GCAGTGGTAG CTTTGGCTCC AGAGATTTGG
  GCCAGGTCGA CCCCCTTTCC CATCTAGAGA AGCAATCCTA GGCTTCATCT GTAGCTGGGG
  GGCTGAACCC AGCCTCTGGC TTCACTCACT AAGTCCAAAG CCTAGGAATC TAAGTCCGAT
  CCGCTGCCCT ACTTCTCCGA GTCCATCACC TGCAGTGTAG TTCTTACGTT GTGGAAATCT
  GCACCGGGCT TTTGCTCTCT CCATCAACCT AAAATTCAAT TTTTTTTTTC TTCCCTACCC
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	DBA/2J
ss46268295	mCV24180483	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	DBA/2J
rs33373152					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84625465 () rs orientation: forward

Symbol	Name	Function Class
Adgrl1	adhesion G protein-coupled receptor L1	1269 bp upstream
Cpgi20661	CpG island 20661	1353 bp distal
Cpgi20662	CpG island 20662	549 bp proximal
Gm26721	predicted gene, 26721	within coordinates
Rr186961	regulatory region 186961	within coordinates
Tssr78300	transcription start site region 78300	1122 bp upstream
Tssr78301	transcription start site region 78301	1252 bp upstream
Tssr78302	transcription start site region 78302	1260 bp upstream
Tssr78303	transcription start site region 78303	1278 bp upstream
Tssr78304	transcription start site region 78304	1611 bp upstream
Tssr78305	transcription start site region 78305	1756 bp upstream
Tssr78306	transcription start site region 78306	1784 bp upstream
Tssr78307	transcription start site region 78307	1870 bp upstream