rs33373340 SNP Detail

Summary

• ID
  rs33373340
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:92479287 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTACG CTGTAGCGTT ATAATTTTAC
  Y
  CTCTTCAGCA TCCCAGCTTT AGGAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45770940	mCV23365536	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	C
ss148831552	ENSMUSSNP710257	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		C
ss321612287	CHEV_5_92760454	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33373340					SNP	T	T	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:92479287 () rs orientation: forward

Symbol	Name	Function Class
Art3	ADP-ribosyltransferase 3	399 bp upstream
Rr125466	regulatory region 125466	713 bp proximal
Tssr47295	transcription start site region 47295	365 bp upstream
Tssr47296	transcription start site region 47296	390 bp upstream
Tssr47297	transcription start site region 47297	400 bp upstream