rs33373738 SNP Detail

Summary

• ID
  rs33373738
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:125572450 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACTG GTGAATTGTG TTAGCTAAGC
  R
  GTTAAATTTG TGACAGGTTT TTTGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45271192	mCV22613860	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss147486215	ENSMUSSNP5790679	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss320497853	CHEV_2_125556266	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33373738					SNP	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125572450 () rs orientation: forward

Symbol	Name	Function Class
BC026863	cDNA sequence BC026863	1636 bp upstream
Cpgi12201	CpG island 12201	1267 bp proximal
Rr397270	regulatory region 397270	1217 bp upstream
Rr564273	regulatory region 564273	1012 bp proximal