rs33376034 SNP Detail

Summary

• ID
  rs33376034
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:68514690 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAG TGAAGTGGCC CGGGCATCCT
  R
  ATGGGGCAGA GCAAACAACA AGGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46268421	mCV22628462	ABI	CRAMUS_MOUSE	f	SNP		G	A
ss145062368	ENSMUSSNP6222257	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss322687926	CHEV_8_70585937	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33376034					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:68514690 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20399	CpG island 20399	within coordinates
Psd3	pleckstrin and Sec7 domain containing 3	within coordinates
Rr664367	regulatory region 664367	within coordinates
Rr664368	regulatory region 664368	179 bp proximal
Tssr81474	transcription start site region 81474	662 bp upstream
Tssr81475	transcription start site region 81475	208 bp downstream
Tssr81476	transcription start site region 81476	406 bp downstream