rs33378655 SNP Detail

Summary

• ID
  rs33378655
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:156717076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTCTGTGCT TGGCATATTG AGGGCATGGT TGCCAAAAAG
  TAATAGGAAG TGAAGTCTCA AGTGATGGGT CTCATAAAGG CAGACAGGTG GTAAAGGTCA
  R
  CTGGACAAAG TTATGGGGTA CTTAATTCTG TGTAAAACTG AGAAGCAAGT AGGGAGAGGT
  CAGCCTGGGA CCCATCGTAC CTACTGTATA GAACCACCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45271620	mCV25127106	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss148084961	ENSMUSSNP5534436	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss320582515	CHEV_2_156700892	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33378655					SNP	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156717076 () rs orientation: forward

Symbol	Name	Function Class
Rab5if	RAB5 interacting factor	1593 bp downstream
Rr568378	regulatory region 568378	849 bp distal
Rr568379	regulatory region 568379	1312 bp distal
Sla2	Src-like-adaptor 2	Intron