rs33379021 SNP Detail

Summary

• ID
  rs33379021
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:129979418 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATATAATGGG ACACCTAAGG GAAGAATAAC AGCTAACCTG AATATATTCG TTGTTAGGAA
  ATGTTTCGCT TGCCTTTTTA CCTTCTGTCT CTTTCTACTC TCTACTTTAT TTTAGTAATA
  TTTTTATTTT ACCTTACCCA GCAGAATTTT GTCCAGTTTT TATTATTTTT TTAAAAATAT
  ACTCACATTT GGGTGCTGGA GAAATGACCA AAAAGTTAAG AATAGTTGCT GATCTTTCAG
  AGGGCCTGTG TTCTGTTCTC AGCACCCAAA TTAAGAAGCT CAATGTGGGG GTGACCTCTT
  M
  CTGCGTTCTC ACGGCTCTTT CTGTTTGTGA GACCTGTGGC TCGACCCTGC TGATAGCAAG
  ATGTCTTCAG GAAATGCAAA AATTGGGTAT CCTGCTCCCA ACTTCATAGC TACAGCTGTT
  ATGCCAGATG GACAATTCAA AGATATCAGC CTACGTGAAT ACAAAGGAAA ATATGTTGTG
  TTCTTCTTTT ACCCTCTTGA CTTTACTTTT GTGTGTCCCA CGGAGATCAT TGCTTTCAGT
  GACAGAGCAG ATGAATTTAA GAAACTCAAC TGCCAAGTGA TTGGAGCTTC TGTGGATTCT
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46269005	mCV24003258	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33379021					SNP	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:129979418 () rs orientation: forward

Symbol	Name	Function Class
Gm21399	predicted gene, 21399	61 bp upstream
Gm64945	predicted gene, 64945	within coordinates
Tssr2751	transcription start site region 2751	2 bp downstream
Tssr2752	transcription start site region 2752	13 bp upstream
Tssr2753	transcription start site region 2753	284 bp upstream