rs33380915 SNP Detail

Summary

• ID
  rs33380915
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:18120076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGA TGAGTGACCT CTGAAAGGCA
  R
  GGTATCCAGA GACTTCATCT CAGGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39529097	mCV22802857	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	A
ss145228040	ENSMUSSNP4562787	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
ss325312435	CHEV_17_18036778	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33380915					SNP	A	A	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:18120076 () rs orientation: forward

Symbol	Name	Function Class
Rr329600	regulatory region 329600	76 bp distal
Rr336961	regulatory region 336961	156 bp distal
Rr343850	regulatory region 343850	791 bp proximal
Rr343851	regulatory region 343851	950 bp proximal
Tssr142835	transcription start site region 142835	182 bp downstream