rs33382222 SNP Detail

Summary

• ID
  rs33382222
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7777414 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTTGTATG ATCAGGCTCT
  GCTTATTTAC ATGGTGCAAA AATCAAACCC AGGTCCTCCT GTGTGTTAGG TAAGCATTCT
  CCCAATTGAG CTATGTCCCC AGCTCTCAGA TCAGCTGCAC AGATTTCTCC TGTGAAATGC
  TGGTGACAGC TGTGGAAAAA TACCAGTATA TGTATACAAC TAAAGGGAAA CAGCAAATAG
  Y
  GGAGGGGTCA CAGGTAGTGA CATAGAGGCA CTTGCTTGCC CTTTGGGTTC AGGGGCTGGA
  CTCACAGGGC ATCAGGCCTC TATCACGTGC TGGCCAGAAA TGGTGGCACA CACCTTTTAT
  TCCAGCATGT ACTAGGTAGA GGTAGACAGA TCTCTGAGGC CAGTGATCTC CATAGCCAGT
  TTCAGAGCAG TCAGAGCTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss46806196	NES10982254	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T		C	T	T	C
ss325888368	CHEV_X_7488301	CHEVERUD	SCREENING_POP	f	SNP										T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs33382222					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46806196	NES10982254	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7777414 () rs orientation: forward

Symbol	Name	Function Class
Gm10490	predicted gene 10490	1247 bp downstream