rs33382903 SNP Detail

Summary

• ID
  rs33382903
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:121393953 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGCACAAG ACCACAGCTC
  AAGTCCCAGT CCTGCTGCTG CCAGATAAGC CTCAGTGTGA CAGCAACTGT AAGGTGCGAT
  GGGTGACATC ATACAAGACA ATGTGTGGCG ATGACACTAA CCTCAGTAAG CTGATATGCA
  CAGCCAGTGA GAATGCCAAG AGCATTGTAA TGCTGGTGGG ATTTTAAAAT AGTGCAGTCA
  S
  TTTGGGAAAT AGTTGGGAAT TTTTTCCCAA AAGGTTACAG ACTCAACAAT TCCACTTTTA
  CGGATATGCC CAAGAGAATT TTAATGTGTC TATAGGTGCA TGAATGTTAA TACTTCAACT
  ATTTAGGGTA CCCAAACAAT GTGAGCAATC CAGTCCAGCT GCAGAGAAGA ATGTTCATCA
  GTCAATAGGC AGATAAGCAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45272184	mCV23863878	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C
ss147391240	ENSMUSSNP2714362	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33382903					SNP	G	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121393953 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Frmd5	FERM domain containing 5			Intron
				Noncoding-Transcript-Variant
Rr563849	regulatory region 563849			23 bp distal