rs33383104 SNP Detail

Summary

• ID
  rs33383104
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7777783 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCATAGCCA GTTTCAGAGC
  AGTCAGAGCT ATAGACTCTC CAGAGTTAAG TAAACCTAGA CCCTTACACC AGACAAGTAC
  TTCCCCACCG AGCTATGCCC TAGCCCCTCA CCTCTAATTC CTCCAGCTCC TTTATGCCAT
  CTCTTCTGTC TAGGATTTCT GAGGCGTTCT TTCAGTTTAC TCCTTCCGGA AGCTTCCATG
  K
  CTTTCCTTCC TTAACCTCTG GTCTCGGTTC CGTCCCTCGC GTCCCATTTG TTCTCCCTGG
  CTCTCTGCGT GGCCTAGATC TGCTATCTTA CAAGAAGGCC TGTAAAGGGG CTGGCCAGAT
  GGAGCAGCAA GTAATGGGAC TTGCTACCAA GTCTGAAGAC TTAAGTTCAA GGCCTCAGAA
  CCCATGTAGT GAAAAACAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46806199	NES10982234	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33383104					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46806199	NES10982234	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7777783 () rs orientation: forward

Symbol	Name	Function Class
Gm10490	predicted gene 10490	1616 bp downstream
Rr689690	regulatory region 689690	860 bp distal