rs33383110 SNP Detail

Summary

• ID
  rs33383110
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7777819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCCAGAGT TAAGTAAACC
  TAGACCCTTA CACCAGACAA GTACTTCCCC ACCGAGCTAT GCCCTAGCCC CTCACCTCTA
  ATTCCTCCAG CTCCTTTATG CCATCTCTTC TGTCTAGGAT TTCTGAGGCG TTCTTTCAGT
  TTACTCCTTC CGGAAGCTTC CATGGCTTTC CTTCCTTAAC CTCTGGTCTC GGTTCCGTCC
  Y
  TCGCGTCCCA TTTGTTCTCC CTGGCTCTCT GCGTGGCCTA GATCTGCTAT CTTACAAGAA
  GGCCTGTAAA GGGGCTGGCC AGATGGAGCA GCAAGTAATG GGACTTGCTA CCAAGTCTGA
  AGACTTAAGT TCAAGGCCTC AGAACCCATG TAGTGAAAAA CAGAACCAGC TCCCACAAGC
  TGTCTTCTAA TGTCTACATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46806205	NES10982237	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33383110					SNP	C	C	C	C	C	C	C	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46806205	NES10982237	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7777819 () rs orientation: forward

Symbol	Name	Function Class
Gm10490	predicted gene 10490	1652 bp downstream