rs33385104 SNP Detail

Summary

• ID
  rs33385104
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:36275488 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTCA ACCCTCTGAA GTGGCAGGGC
  Y
  GGTAAAAGCC ACTGTCATCT GCAGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45772158	mCV22695876	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss148234263	ENSMUSSNP6398439	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
ss321510977	CHEV_5_36460793	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33385104					SNP	C	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:36275488 () rs orientation: forward

Symbol	Name	Function Class
Gm52810	predicted gene, 52810	1829 bp upstream
Rr610106	regulatory region 610106	within coordinates
Sorcs2	sortilin-related VPS10 domain containing receptor 2	Intron