rs33385179 SNP Detail

Summary

• ID
  rs33385179
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:81009075 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTGAGCTACT TATTTTGGGT CCTGAGATCT AATCTGAGTG AATAGGGGAC CATCTCTACA
  GCCTCCTTAT GTTAATAAAA TGTTAAATGT TAACGTTAAA ATGAAAACAA CCAACGAACA
  AATACACAGT TGTTATTTTC AGGTTTGGAA TAAGCGCTGA CTAGGAACAT GAAGGAATCA
  AAGGAGTAAA ACTAAGCCAG TTGACAAGCT TCTTCAGGAC AATCTAGTAG GTAGAGAGAA
  GAGAAGAGAA GAGAAGAGAA GAGAAGAGAA GAGAAGAGAA GAGAAGAGAA GAGCAGAGAT
  Y
  GAGTATAGTA GATCCTGAGA TAAACTCAAA CTTAAAAGAA AAACAATAAA CAAACAAGAA
  AACTCGAAAC TGTGGAAACA GACTAAAAAT AACCATGCAC ATTCCACACC CAGCACACCC
  ACAGTAGAGT CTAGAGATGC GCCTGGCTGG GACAGGTGTA AGCCCTGATT CCAGTATCTT
  CTTGGTTTCT ATTATACACA AGTCTGAACA GGAGCACGCT GGTCTAGACG GAGGGAGGAG
  GGGCTACACA CCTGTCCAGA CTCTGGAATA GGAAGAGGCC ACTGTATTAT CTAGCAGGCA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss39529487	mCV22619804	ABI	CRAMUS_MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs33385179					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:81009075 () rs orientation: forward

Symbol	Name	Function Class
Gm66613	predicted gene, 66613	within coordinates
Map4k3	mitogen-activated protein kinase kinase kinase kinase 3	within coordinates
Tssr149503	transcription start site region 149503	867 bp upstream
Tssr149504	transcription start site region 149504	361 bp downstream