rs33386377 SNP Detail

Summary

• ID
  rs33386377
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:119166207 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAT CTTTTTCCTG CCTCCCTATC
  Y
  CAAATTCAAA GCCCCTTATC TTCTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45272590	mCV22548557	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss147329724	ENSMUSSNP656043	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss320474889	CHEV_2_119161462	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33386377					SNP	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119166207 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12118	CpG island 12118	1805 bp proximal
Dll4	delta like canonical Notch ligand 4	62 bp downstream