rs33392856 SNP Detail

Summary

• ID
  rs33392856
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:30325547 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATTA AACACTTATG AAAACGTGCC
  Y
  AGCCTCATTA CTAATCACGG AAATG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39530634	mCV25275547	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	T
ss145440057	ENSMUSSNP1497397	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33392856					SNP	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:30325547 () rs orientation: forward

Symbol	Name	Function Class
Gm53994	predicted gene, 53994	1643 bp upstream
Rr525166	regulatory region 525166	919 bp distal
Rr525167	regulatory region 525167	1007 bp distal
Zfand3	zinc finger, AN1-type domain 3	within coordinates