rs33393310 SNP Detail

Summary

• ID
  rs33393310
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:71698615 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAC AGGGTTCCAG GTAGATCAGG
  Y
  TGCCCCCAAA CTAATGTTGC TTAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39531146	mCV23196559	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C	T
ss145895091	ENSMUSSNP4142190	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss325442935	CHEV_17_71740960	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33393310					SNP	C	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:71698615 () rs orientation: forward

Symbol	Name	Function Class
Gm38220	predicted gene, 38220	218 bp downstream
Smchd1	SMC hinge domain containing 1	within coordinates