rs33395911 SNP Detail

Summary

• ID
  rs33395911
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:121267543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCAA GTGCTGGGAT TAAAGGCATG
  S
  GCCACCACAC CCGGCTATCC CTCCT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45273228	mCV22586076	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	C
ss147386083	ENSMUSSNP283724	ENSEMBL	ENSEMBL_Sanger	f	SNP			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs33395911					SNP	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121267543 () rs orientation: forward

Symbol	Name	Function Class
Ell3	elongation factor RNA polymerase II-like 3	1965 bp downstream
Pdia3	protein disulfide isomerase associated 3	within coordinates
Rr563821	regulatory region 563821	1921 bp distal
Rr563822	regulatory region 563822	2000 bp distal
Tssr19767	transcription start site region 19767	1140 bp downstream
Tssr19768	transcription start site region 19768	698 bp downstream
Tssr19769	transcription start site region 19769	545 bp upstream
Tssr19770	transcription start site region 19770	843 bp upstream