rs33396589 SNP Detail

Summary

• ID
  rs33396589
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:144224877 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAGCACCAC GCCCTGTTTT ATGCAGTGAT GGGATAAAAC
  TTAGATCCTT AGATCTACCA AGTGAGCTAA ACCCCAGCCC CAGCCCTCAA AGGGTTAAGT
  R
  TGGTATCTCT TCCTCGTTTG TCACAGAGTT AAGGGAGTAG TACACTGTGG GATTATCTTT
  TACCTTCGGG TACATTCCTC ACCAGTGGTT TTGTTTTAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45273535	mCV23223291	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss147792537	ENSMUSSNP6921667	ENSEMBL	ENSEMBL_Sanger	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33396589					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:144224877 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kat14	lysine acetyltransferase 14			Intron
				Noncoding-Transcript-Variant
Rr566452	regulatory region 566452			within coordinates