rs33396855 SNP Detail

Summary

• ID
  rs33396855
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:23631908 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACCTCTCC TCAAGTAGCC
  CCTTGGGAGG TAACAGTGGC TTTCTCGTCC TTGCTGGCAT GGTCCTTGAT GAGGTAGCTG
  CTTGCTGCTC CCAACCCACC CCATCCTTGC ACTACTAGCT CAGTTCAGAG TTAAAACCAG
  ACTCTCAGAA TCCCACTCCT CAAACTAGCC ACTGTCTCTG CCCCTCCACG TCCTCTTCAG
  R
  CCTGTGCCTC TCTGTTGACA CCAGTCTGCT GGAGAGTACA CAAAATCAGG GGCTTGGGTT
  TATTTTGCTT ATTTATATTT TCTTTTGTCT TTTTTGGCTG TGTTAGGGGG GTGGGACCAG
  AGATAGGCAT TCTGAGCCAC ACCTTCAGTC CCTGTGCAAT TTAGTTATAA ACAGAGTCTC
  TCTATATAGC CCTGGCTGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46271119	mCV23198217	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33396855					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:23631908 () rs orientation: forward

Symbol	Name	Function Class
Ank1	ankyrin 1, erythroid	within coordinates
D8Rck1	DNA segment, Chr 8, Rockefeller University 1	322 bp distal
Gm15816	predicted gene 15816	within coordinates
Mir486	microRNA 486	663 bp upstream
Mir3107	microRNA 3107	681 bp downstream
Rr186384	regulatory region 186384	1507 bp distal
Rr186385	regulatory region 186385	1092 bp proximal
Tssr76619	transcription start site region 76619	1851 bp downstream
Tssr76620	transcription start site region 76620	1765 bp downstream
Tssr76621	transcription start site region 76621	1724 bp downstream
Tssr76622	transcription start site region 76622	1087 bp upstream
Tssr76623	transcription start site region 76623	1198 bp upstream
Tssr76624	transcription start site region 76624	1356 bp upstream