rs33398816 SNP Detail

Summary

• ID
  rs33398816
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:103964101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATAGTGGCAC AAACGCTATG GGAGTGAATA GTTGCTTTTT
  TAAATCGTAT TTGATGCCTG TTCCATAAAA GGAAATAGAT GTGTAGTAGT GTAAATTTGG
  R
  CAAGAACCAA CTGTTGAGGA TCCCTTAGGG CCCATTGATG CATCAATTGC TACTATTTTG
  CTAAATTTGC ATAGTATGTA ACTGCCTTCT AAATTCATA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46271142	mCV23903158	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	A
ss145726456	ENSMUSSNP5015695	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
ss322824573	CHEV_8_105761369	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33398816					SNP	A	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:103964101 () rs orientation: forward

Symbol	Name	Function Class
Rr668523	regulatory region 668523	1516 bp distal
Tssr79019	transcription start site region 79019	1568 bp downstream