rs33400036 SNP Detail

Summary

• ID
  rs33400036
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:57565739 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTACAAACTC ACTCAGCAGC TGGAAGCAAT TGACATTGGG TAGCATTTGA CTTGAACAAC
  ACTTTAAAAA GTCAACTTGA ATCTTAATTG AAATACCCTA TATTTCACAC TGGATATATG
  ACTCAATTCT AATCTTTTGT TTCCTTTTTG AGAGAAAAGG CAGTGGAGAA CCATGCTGTT
  ACTGGGGTTA TTTATTATCA ATTACAGTAT TTACTCTAAC AAAGATGTTC TTTAAAACAT
  ACTCCACAAC ATACTTCTAT TTGTGTGTAT ATATATGTGT GTGTATATTT ATGCATATAT
  R
  TATATAATAA TGATTTAATA TATATACACT AAATTATTAA TCTATAGCTG ATGGTTGTAA
  ATGTTGCCTT TTTGAGAAGC AATACAAAAA GCTAAAATGA ACAAAAATTA ACATGACCTA
  GACAATTCAT AAGTGTTTAT TGAGCATTAG AACTGCTTAG CCTCACCCCT ATATTAATGT
  AACTACTTAA AATATTTTTC ATATTCAAGT GTTTTATATA TTTGTTTACA TACTTGTGAT
  GCTAAAAGTT CTTAAACTTT CTAAACCCTA TTACATTAAG ATAATTCAGA GTGAGATACA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46271246	mCV22561964	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33400036					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:57565739 () rs orientation: forward

Symbol	Name	Function Class
Rr678	regulatory region 678	within coordinates
Rr663682	regulatory region 663682	1438 bp distal