rs33404047 SNP Detail

Summary

• ID
  rs33404047
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164719109 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCTG AAGGGTGAAT TATGTAAAGC
  R
  TGGGGAAATT AGTGACATCC CAGGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45274338	mCV23132298	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss148232693	ENSMUSSNP925813	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss320607034	CHEV_2_164702689	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33404047					SNP	A	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164719109 () rs orientation: forward

Symbol	Name	Function Class
4930445K14Rik	RIKEN cDNA 4930445K14 gene	1098 bp downstream
Cpgi12676	CpG island 12676	1542 bp proximal
Gm75548	predicted gene, 75548	1948 bp downstream
Rr569747	regulatory region 569747	1330 bp distal
Rr569748	regulatory region 569748	704 bp proximal
Rr569749	regulatory region 569749	1409 bp proximal
Rr569750	regulatory region 569750	1474 bp proximal
Rr569751	regulatory region 569751	1678 bp proximal