rs33407106 SNP Detail

Summary

• ID
  rs33407106
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:94210891 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGGC AATGGAATGT GAATAGACAT
  K
  TAATTTTTCA GAAATTTTTT ACCTA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45273961	mCV25142102	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	T
ss146953818	ENSMUSSNP6873444	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		T
ss320397545	CHEV_2_94220703	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33407106					SNP	T	G	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:94210891 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr561371	regulatory region 561371			1655 bp distal
Ttc17	tetratricopeptide repeat domain 17			Intron
				Noncoding-Transcript-Variant