TGTCT TAAAAATAAG TTGGGTATCT K CTGAGAAATA ATCTCTATCA GGAGG K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss39532554 | mCV25027489 | ABI | CRAMUS_MOUSE | f | SNP | G | G | T | G | ||
ss145202484 | ENSMUSSNP936544 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | G | |||
ss325306436 | CHEV_17_15334849 | CHEVERUD | SCREENING_POP | f | SNP | G | G | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs33408405 | SNP | G | G | T | G | G | G |
Location: Chr17:15418147 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm35502 | predicted gene, 35502 | within coordinates | ||||||
Rr329518 | regulatory region 329518 | 854 bp proximal | ||||||
Rr334312 | regulatory region 334312 | 654 bp proximal | ||||||
Rr340587 | regulatory region 340587 | 1748 bp distal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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