rs33410071 SNP Detail

Summary

• ID
  rs33410071
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129716966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTGT TTTGTCCCCC ACCCCCGGCC
  Y
  CCACAGAGTC CAGAGACAAG GAAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45275497	mCV25265810	ABI	CRAMUS_MOUSE	f	SNP	C		T
ss147591296	ENSMUSSNP5442028	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss320505905	CHEV_2_129700782	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33410071					SNP	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129716966 () rs orientation: forward

Symbol	Name	Function Class
Rr564988	regulatory region 564988	838 bp distal
Rr564989	regulatory region 564989	1314 bp distal