rs33410674 SNP Detail

Summary

• ID
  rs33410674
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:121264935 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATAG CCCTGGCTGT CCTGGAACTC
  R
  CTTTGTAGAC CAGGCTGGCC TCGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45275300	mCV22586065	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss147386029	ENSMUSSNP6929783	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
ss320483149	CHEV_2_121260190	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33410674					SNP	G	G	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121264935 () rs orientation: forward

Symbol	Name	Function Class
Pdia3	protein disulfide isomerase associated 3	within coordinates
Rr563821	regulatory region 563821	482 bp proximal
Rr563822	regulatory region 563822	587 bp proximal
Tssr19765	transcription start site region 19765	917 bp downstream
Tssr19766	transcription start site region 19766	443 bp downstream
Tssr19767	transcription start site region 19767	1457 bp upstream
Tssr19768	transcription start site region 19768	1901 bp upstream