rs33413390 SNP Detail

Summary

• ID
  rs33413390
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:147784123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTTTTATTC TGCATAAAAA CAGCCTGGCA GACCCCAAGC
  CTTGGAAACC TGACCAGTAA TTTCTTCTGA GATTTTAAAA ATAATTTCCA GGATTTTTTT
  Y
  CCCTTCTGGT CTAGAAAACA AGGGTTCTTG TGGAAAGATT ATTTTTACGT AGAAAATACA
  GCTTTTAATC CCAGCACTAG GGAGGCAGAG GCAGGTGGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45275435	mCV24540186	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
ss147906904	ENSMUSSNP3375974	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33413390					SNP	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:147784123 () rs orientation: forward

Symbol	Name	Function Class
Rr566828	regulatory region 566828	338 bp proximal