rs33414981 SNP Detail

Summary

• ID
  rs33414981
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:126798872 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTTTTACT TTTCACAGGC
  CCGTGCTGTG GTTACATCCC AGGCTCATGG GCAGAGGCAC ACCATGCTTT CAGACCTTTC
  ATTGGGGTCT GTGCTCTTAG CCAATGGTCC AATTCTTAAC CCTTTTGTAA AGAAAATATG
  CATGGTTCCC ATCATAATGC CTTTGACTTC CTAATTTAAA AAGCCAATTC TATTAGGCTG
  Y
  AAAGCATACA ATATTAAGAA TAACCTGTTT GTTTTAATTT TGTCATGCAA ACCTATTTCT
  TTTTTACAAT GTAGTCTAGA GGCAGGTGGC ATTTCTAGAT GTGGGGAGAT AGTTCAGGAA
  GTGAAGCAAC CCACAAACCC AGAATGCACA TATAAGCACT GCACAGCATG GCTCCCACCT
  GTAATTCCAG AATTCAGGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49482470	NES12883243	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33414981					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49482470	NES12883243	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:126798872 () rs orientation: forward

Symbol	Name	Function Class
4930599A14Rik	RIKEN cDNA 4930599A14 gene	1046 bp downstream