rs33421546 SNP Detail

Summary

• ID
  rs33421546
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:49345595 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAAG ACTGTGTACA AACAAAGCCA
  Y
  CTCCCTAGTC CCTCATTTTC CGGCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39534433	mCV23750479	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss145726091	ENSMUSSNP3593569	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss325411084	CHEV_17_49177892	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33421546					SNP	T	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:49345595 () rs orientation: forward

Symbol	Name	Function Class
Lrfn2	leucine rich repeat and fibronectin type III domain containing 2	within coordinates
Rr337874	regulatory region 337874	883 bp distal