rs33423533 SNP Detail

Summary

• ID
  rs33423533
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101129126 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTGACGTG AGGGAGGCAC
  CAGGAATGCA GGGACTGGTA GAGGCCTGCA TGGGAAAGCA TTGTGTGTTA CCAATGAGTG
  ATCTGAGTGA TCAATGAGTG GGCTGAGTGA TCTGTGGTAT TAAAGCACCC ATGCCTTTGT
  TTTGCAGACA CTAGCAGGGC TGAACCATGT GGCAGATAAT AAGGGAAATT GTCATCAAAG
  R
  ACTTAAAGCA CAGTAGAATA AATGGTAAGT GGTAGAGAGA ATATTTTTAC AGTCTTCTGC
  CTCACCAATG CATAGGAATG TACATTTAAA AGGTTACAAT AGCTTAATCT GCCAAAGCAT
  CAGACATTTT TATCAGGTTA TACTGACTAT ATACAAAAAT GACCTTTTCA TATGTGTGTA
  TATGTATATA TATTTATATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss46812332	NES10718804	PERLEGEN	MM_PANEL2	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs33423533					SNP	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46812332	NES10718804	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101129126 () rs orientation: forward

Symbol	Name	Function Class
Gm65590	predicted gene, 65590	within coordinates
Rr581978	regulatory region 581978	1712 bp distal