rs33424316 SNP Detail

Summary

• ID
  rs33424316
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:114580951 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGATTGGAGC GAGGGATTCA TCCTCTTAAA TTTATCATTT
  CCTTCCTACT GGTTTTAATC TACGTTGGAG GCATGTCTAA ATCTATATGA CATGAAAATC
  R
  TATTTTGGGG AGAAAAGTAA ATGTCACACA TGTCACACAT TTTGTCTCAT ACATAGAATA
  TAAGTTAATA CATATACAAA CACACATGGC ACCGAATGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46273957	mCV23924409	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss145776765	ENSMUSSNP2501484	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33424316					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:114580951 () rs orientation: forward

Symbol	Name	Function Class
D8Mit318	DNA Segment, Chr 8, Massachusetts Institute of Technology 318	1962 bp proximal
Rr179523	regulatory region 179523	within coordinates
Rr179524	regulatory region 179524	250 bp proximal
Tssr82999	transcription start site region 82999	566 bp downstream
Tssr83000	transcription start site region 83000	598 bp downstream
Tssr83001	transcription start site region 83001	614 bp downstream
Tssr83002	transcription start site region 83002	629 bp downstream