TAAAC ATAACAATTC TTCCTTCCCC Y ATAGAAATCC CACCCAGATA TGGAT Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
---|---|---|---|---|---|---|---|---|
ss46274606 | mCV23924111 | ABI | CRAMUS_MOUSE | f | SNP | T | C | C |
ss145776716 | ENSMUSSNP4171659 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | C | C |
SNP Consensus Information | ||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
||||
rs33424961 | SNP | T | C | C |
Location: Chr8:114579558 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr174139 | regulatory region 174139 | 758 bp distal | ||||||
Rr179523 | regulatory region 179523 | 643 bp proximal | ||||||
Rr179524 | regulatory region 179524 | 1643 bp proximal | ||||||
Tssr82999 | transcription start site region 82999 | 1959 bp downstream | ||||||
Tssr83000 | transcription start site region 83000 | 1991 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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