rs33426344 SNP Detail

Summary

• ID
  rs33426344
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31405087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTGTCAGCA CTGTGCCTTG GATGCAAGGG ACAAAGATGT
  CCCTGGCAAG TACATGACGT GACCATCACT GAGAGTATTA GCATTACCAA AGCAGTGGAA
  K
  TAGCTGAGTC ATGCCTTCTA TAGCAAGCTC ATAGGAGAAA ATAACACACC ATGCCAGTTC
  TCAGACAAGA CTTCGTCATC TTGTACTGCT TGGTACAAG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss39535020	mCV24387634	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss144591524	ENSMUSSNP1235065	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss145457871	ENSMUSSNP6719526	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33426344					SNP	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31405087 () rs orientation: forward

Symbol	Name	Function Class
Rr525395	regulatory region 525395	1226 bp proximal
Rr525396	regulatory region 525396	1487 bp proximal
Tmprss3	transmembrane protease, serine 3	within coordinates
Tssr5079	transcription start site region 5079	108 bp downstream
Tssr5080	transcription start site region 5080	507 bp downstream