ACGATCAAGA GTTATAGCTG AGCTATGAAT GCGGTGGGTA AGTGCACAAA AATAAACTTG CTATTGAAAG TTCATGTCGA GCCAATGTGA ACCTCAGCAC W TCCCTTCGGG ATGTCTAATC TGACCTTATA GAGACTGGTA TTGCTTTGGG GTCAGGTTCA TTTCAGCATA TACTTTTTAA AATTTGCAAT ATTTTTTAT W = A/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss39535061 | mCV25027479 | ABI | CRAMUS_MOUSE | f | SNP | T | T | A | T | ||
ss145202463 | ENSMUSSNP7129538 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | T | ||||
ss325306432 | CHEV_17_15333584 | CHEVERUD | SCREENING_POP | f | SNP | T | T | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs33429063 | SNP | T | T | A | T | T | T |
Location: Chr17:15416882 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm35502 | predicted gene, 35502 | within coordinates | ||||||
Rr334312 | regulatory region 334312 | 1919 bp proximal | ||||||
Rr340587 | regulatory region 340587 | 483 bp distal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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