rs33429831 SNP Detail

Summary

• ID
  rs33429831
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28019388 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGTTACAGGA ACTTATTGCA ATGCAAACCT CTGAGGCGAA GTCTGAGGGC GGTGCTGTGT
  ATGTGCACTG CACTGTGTAC TCAGGAGGAC AAAGGCAGAC TGTGCATGTA ACCTGAGGCT
  GCACTCTGCT GAGTCACTTC CGTCACACAC CTCGGGGTCC AACAACTCAC GTTTCGGTCA
  AAAGAGCAGG TTTAGAATAA CTCCTTGTTT TGGTCGCTGG ATTTAATTTC CTGAAATGAT
  TTACAATCGC TGTATCTATG GTAACTACAG TTTCTGGAAA TTCTGAGCCA CTGTGAGGAG
  W
  CAATGTGGAT TGCCCCAAAC ACCACAGGAT GACCGCACAA AGCATGTCCA GACACAGCGC
  TCCTTACACA CGGTTCTGGT TTGTCATGAA ACTCAGATAG TGAGTTATGG TATGAGCAGA
  TAAATCTGCA ACTAAGCAGA ATTTCAAACT GATTTGATCC TAAGACTGTC AAAGAGGTGT
  TTCTTGGTTT AAAAAATACA AAGGTTTGAT TTTTTTAAAG TTGCCAAAAA GTATCTGAAT
  ACACAATTTA TCCTATAATT TAGCTGTTAT TGCTGTAAAA ATTAGGAAAT ATAATAAAGG
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss39535069	mCV25269823	ABI	CRAMUS_MOUSE	f	SNP	A	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs33429831					SNP	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28019388 () rs orientation: forward

Symbol	Name	Function Class
Ilrun	inflammation and lipid regulator with UBA-like and NBR1-like domains	within coordinates
Rr330150	regulatory region 330150	813 bp proximal
Rr392473	regulatory region 392473	within coordinates