rs33431893 SNP Detail

Summary

• ID
  rs33431893
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:88532904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGTGCCTA ATGGCCTGCT
  GTCCCGAGTG GGTCTCAAAC ACAGCAAACT TCACAGCCAC AAGGAGTGCG GACCGATGTC
  AGTTTATTGG GCAACAAAGG GATTTTTTTT TTTAAATATG TGACCAGAAT GCAGACCAGG
  CTGCAGTGAA CTGGGGAGAC AGAATGGCGC TCCCTTCGCC ACCCCCAGAT TCTGGGAGAT
  M
  CTTGCCTCCC TGCTGCGTCT CTTTGAATTG AATTGTTCTT TGGGTTTTGT TCTAATTATC
  TAAACATGTG TAACTATGTT CCACCAGGCA TTTCGACCAG CAGAGAAGAT AACCTAGCCT
  CAACGTACGT TACAGGGCCC TGAGTTCAAG TCAGCCTTGA CACCAGCCTG AAACATTCGT
  GCAGACATAC AGCCACCTAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46275609	mCV24221126	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	A
ss145452026	ENSMUSSNP2291314	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		A
ss322761688	CHEV_8_90330175	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33431893					SNP	C	C	A	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:88532904 () rs orientation: forward

Symbol	Name	Function Class
Rr667021	regulatory region 667021	1848 bp distal
Rr667022	regulatory region 667022	1347 bp distal
Tssr82324	transcription start site region 82324	1874 bp upstream
Tssr82325	transcription start site region 82325	1813 bp upstream
Zfp423	zinc finger protein 423	within coordinates