rs33432242 SNP Detail

Summary

• ID
  rs33432242
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24658356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTT TCAGGAATGG AGAAATAGGT
  Y
  AGTGATTAAG AACACTAGCT GCTGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39534819	mCV25112377	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C	T
ss145355243	ENSMUSSNP741793	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss325331696	CHEV_17_24576327	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33432242					SNP	T	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24658356 () rs orientation: forward

Symbol	Name	Function Class
Dnase1l2	deoxyribonuclease 1-like 2	698 bp downstream
Eci1	enoyl-Coenzyme A delta isomerase 1	66 bp downstream
Rr329767	regulatory region 329767	1556 bp distal
Rr329768	regulatory region 329768	45 bp proximal
Rr329769	regulatory region 329769	1645 bp proximal
Rr337043	regulatory region 337043	20 bp proximal
Rr340709	regulatory region 340709	1772 bp distal
Rr340710	regulatory region 340710	845 bp proximal
Tssr146730	transcription start site region 146730	1013 bp downstream