rs33434305 SNP Detail

Summary

• ID
  rs33434305
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:7235598 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTATACTTG GTAAATATAG CTAAGTATTT TGTAATTTAT
  TTCAAGAAGG TCATAAATAA TAAATAATGC TTCAAAATAA AATTTGCTTA TAATAATGCA
  R
  TTTGGAAGGC AGTGTATGAA TAACTATATC CCACTTTTTT GAAATGCCTT TTAAAATTCT
  AAGCTTAGAA AGTGACAAGC CGACTATATT TGTCAGGGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45778701	mCV24857498	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss147805302	ENSMUSSNP2033835	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss321457755	CHEV_5_7185598	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33434305					SNP	A	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:7235598 () rs orientation: forward

Symbol	Name	Function Class
Gm72407	predicted gene, 72407	within coordinates
Tssr50074	transcription start site region 50074	824 bp downstream
Zfp804b	zinc finger protein 804B	within coordinates