rs33436418 SNP Detail

Summary

• ID
  rs33436418
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101199205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGTG CAACATGCCC TACAGTCCAA
  K
  GCTGATCTCC TGAGCTCTCT CCACT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss46813217	NES10715466	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T		G	T		T
ss320851730	CHEV_3_101095812	CHEVERUD	SCREENING_POP	f	SNP											T			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs33436418					SNP	T	T	T	T	T	T	T	T	T	T	T	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46813217	NES10715466	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101199205 () rs orientation: forward

Symbol	Name	Function Class
Gm32803	predicted gene, 32803	within coordinates
Rr581994	regulatory region 581994	1563 bp distal
Rr581995	regulatory region 581995	953 bp distal
Rr581996	regulatory region 581996	263 bp distal
Rr581997	regulatory region 581997	656 bp proximal
Rr581998	regulatory region 581998	1853 bp proximal
Tssr34785	transcription start site region 34785	1135 bp upstream