rs33438992 SNP Detail

Summary

• ID
  rs33438992
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:15416890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGTTATAGC TGAGCTATGA ATGCGGTGGG TAAGTGCACA
  AAAATAAACT TGCTATTGAA AGTTCATGTC GAGCCAATGT GAACCTCAGC ACATCCCTTC
  R
  GGATGTCTAA TCTGACCTTA TAGAGACTGG TATTGCTTTG GGGTCAGGTT CATTTCAGCA
  TATACTTTTT AAAATTTGCA ATATTTTTTA TAATAAAGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39535798	mCV25027480	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss145202468	ENSMUSSNP4521167	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss325306433	CHEV_17_15333592	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33438992					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:15416890 () rs orientation: forward

Symbol	Name	Function Class
Gm35502	predicted gene, 35502	within coordinates
Rr334312	regulatory region 334312	1911 bp proximal
Rr340587	regulatory region 340587	491 bp distal